de.unirostock.sems.bives.ds.rn

Class ReactionNetworkCompartment

java.lang.Object

de.unirostock.sems.bives.ds.rn.ReactionNetworkEntity

de.unirostock.sems.bives.ds.rn.ReactionNetworkCompartment

All Implemented Interfaces:

GraphEntity

public class ReactionNetworkCompartment
extends ReactionNetworkEntity

The Class ReactionNetworkCompartment representing a compartment in a reaction network.

Author:

Martin Scharm

Field Summary

Fields inherited from class de.unirostock.sems.bives.ds.rn.ReactionNetworkEntity

docA, docB, id, labelA, labelB, singleDoc

Fields inherited from interface de.unirostock.sems.bives.ds.GraphEntity

DELETE, INSERT, MODIFIED, UNMODIFIED

Constructor Summary

Constructors

Constructor and Description
ReactionNetworkCompartment(ReactionNetwork rn, String labelA, String labelB, de.unirostock.sems.xmlutils.ds.DocumentNode docA, de.unirostock.sems.xmlutils.ds.DocumentNode docB) Instantiates a new compartment.

Method Summary

Methods inherited from class de.unirostock.sems.bives.ds.rn.ReactionNetworkEntity

getA, getB, getId, getLabel, getModification, setDocA, setDocB, setLabelA, setLabelB, setSingleDocument

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ReactionNetworkCompartment

public ReactionNetworkCompartment(ReactionNetwork rn,
                                  String labelA,
                                  String labelB,
                                  de.unirostock.sems.xmlutils.ds.DocumentNode docA,
                                  de.unirostock.sems.xmlutils.ds.DocumentNode docB)

Instantiates a new compartment.

Parameters:

rn - the reaction network

labelA - the label of that compartment in the original document

labelB - the label of that compartment in the modified document

docA - the original document

docB - the modified document